eigenstrapping.datasets.load_subcort

eigenstrapping.datasets.load_subcort(structure='tha', data_dir=None)[source]

Loads all the files for the subcortical structures used in the paper - cortical-subcortical gradients and the subcortical ROIs from the 25% probability Harvard-Oxford atlas.

Parameters:

structure (str, optional) – Which subcortical structure to return. Options are ‘tha’, ‘hippo’ or ‘stri’. Default is ‘tha’.

Returns:

data (nib.Nifti1Image) – Subcortical data of cortico-subcortical gradients in MNI152 space.
mask (nib.Nifti1Image) – Mask image of subcortical structure in MNI152 space (i.e., 1 inside structure and 0 outside structure)